Abstract:To systematically reveal the differences in metabolite composition and regulatory mechanisms among three parts of Wasabia japonica Matsum: fibrous roots, rhizomes, and leaves, untargeted metabolomics technology was employed. The metabolites in these parts were identified and analyzed for differences using principal component analysis and orthogonal partial least squares-discriminant analysis, followed by KEGG pathway enrichment analysis. A total of 2883 metabolites were identified in the fibrous roots, rhizomes, and leaves of Wasabia japonica Matsum, and 1741 significantly different metabolites were screened out. In the comparative groups of rhizome vs fibrous roots, leaf vs fibrous roots, and rhizome vs leaf, 883, 1213, and 1108 differential metabolites were identified, respectively. These differential metabolites were found to mainly consist of flavonoids, terpenoids, coumarins, alkaloids, and other functional components. The major metabolic pathways of the differential metabolites were determined to be betaine biosynthesis, flavonoid biosynthesis, tryptophan metabolism, and linoleic acid metabolism. The significant differences in metabolites among different parts of Wasabia japonica Matsum were elucidated, along with their potential biological functions, providing an important theoretical basis for the development of novel functional foods and natural food additives, and also laying the foundation for further in-depth research on the metabolic regulatory mechanisms of Wasabia japonica Matsum.